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Diego Diez Associate Professor diez [at] ifrec.osaka-u.ac.jp |
Education
BA Biochemistry, Complutense University, Madrid, 2001
PhD Biochemistry, Autonomous University, Madrid, 2006
Publications
| Year | Authors | Title | Publication | Cites |
|---|---|---|---|---|
| 2013 | AP Hutchins, D Diez, D Miranda-Saavedra | The IL-10/STAT3-mediated anti-inflammatory response: recent developments and future challenges | BRIEFINGS IN FUNCTIONAL GENOMICS, 2013, 12, 489-498 | 213 |
| 2016 | W Nakai, T Yoshida, D Diez, Y Miyatake, T Nishibu, N Imawaka, K Naruse, ... | A novel affinity-based method for the isolation of highly purified extracellular vesicles | SCIENTIFIC REPORTS, 2016, 6, 33935-33935 | 131 |
| 2010 | B Morte, A Ceballos, D Diez, C Grijota-Martínez, AM Dumitrescu, ... | Thyroid hormone-regulated mouse cerebral cortex genes are differentially dependent on the source of the hormone: a study in monocarboxylate transporter-8-and deiodinase-2 … | ENDOCRINOLOGY, 2010, 151, 2381-2381 | 105 |
| 2009 | CE Wheelock, ÅM Wheelock, S Kawashima, D Diez, M Kanehisa, ... | Systems biology approaches and pathway tools for investigating cardiovascular disease | MOL. BIOSYST., 2009, 5, 588-602 | 103 |
| 2010 | D Diez, ÅM Wheelock, S Goto, JZ Haeggström, G Paulsson-Berne, ... | The use of network analyses for elucidating mechanisms in cardiovascular disease | MOL. BIOSYST., 2010, 6, 289-304 | 92 |
| 2015 | I Bahrini, J Song, D Diez, R Hanayama | Neuronal exosomes facilitate synaptic pruning by up-regulating complement factors in microglia | SCIENTIFIC REPORTS, 2015, 5, 7989-7989 | 88 |
| 2008 | D Diez, C Grijota-Martinez, P Agretti, G De Marco, M Tonacchera, ... | Thyroid hormone action in the adult brain: gene expression profiling of the effects of single and multiple doses of triiodo-L-thyronine in the rat striatum | ENDOCRINOLOGY, 2008, 149, 3989-3989 | 75 |
| 2010 | B Morte, D Díez, E Ausó, MM Belinchón, P Gil-Ibáñez, C Grijota-Martínez, ... | Thyroid hormone regulation of gene expression in the developing rat fetal cerebral cortex: prominent role of the Ca2+/calmodulin-dependent protein kinase IV pathway | ENDOCRINOLOGY, 2010, 151, 810-810 | 69 |
| 2013 | AP Hutchins, D Diez, Y Takahashi, S Ahmad, R Jauch, ML Tremblay, ... | Distinct transcriptional regulatory modules underlie STAT3’s cell type-independent and cell type-specific functions | NUCLEIC ACIDS RESEARCH, 2013, 41, 2155-70 | 68 |
| 2011 | C Grijota-Martínez, D Díez, G Morreale de Escobar, J Bernal, B Morte | Lack of action of exogenously administered T3 on the fetal rat brain despite expression of the monocarboxylate transporter 8 | ENDOCRINOLOGY, 2011, 152, 1713-1721 | 68 |
| 2013 | AP Hutchins, S Liu, D Diez, D Miranda-Saavedra | The repertoires of ubiquitinating and deubiquitinating enzymes in eukaryotic genomes | MOLECULAR BIOLOGY AND EVOLUTION, 2013, 30, 1172-1187 | 56 |
| 2014 | D Diez, A Agustí, CE Wheelock | Network analysis in the investigation of chronic respiratory diseases. From basics to application | AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2014, 190, 981-988 | 46 |
| 2014 | R Stojnic, D Diez | PWMEnrich: PWM enrichment analysis | R PACKAGE VERSION 4 (0), 10., 2014, 18129 | 30 |
| 2011 | D Díez, F Sanchez-Jimenez, JAG Ranea | Evolutionary expansion of the Ras switch regulatory module in eukaryotes | NUCLEIC ACIDS RESEARCH, 2011, 39, 5526-5537 | 30 |
| 2013 | AP Hutchins, D Diez, D Miranda-Saavedra | Genomic and computational approaches to dissect the mechanisms of STAT3’s universal and cell type-specific functions | JAK-STAT, 2013, 2, 25097 | 26 |
| 2014 | D Diez, AP Hutchins, D Miranda-Saavedra | Systematic identification of transcriptional regulatory modules from protein–protein interaction networks | NUCLEIC ACIDS RESEARCH 42 (1), E6-, 2014, 6 | 25 |
| 2012 | D Diez, S Goto, JV Fahy, DJ Erle, PG Woodruff, ÅM Wheelock, ... | Network analysis identifies a putative role for the PPAR and type 1 interferon pathways in glucocorticoid actions in asthmatics | BMC MEDICAL GENOMICS, 2012, 5, 27-27 | 23 |
| 2007 | D Diez, R Alvarez, A Dopazo | Codelink: an R package for analysis of GE healthcare gene expression bioarrays | BIOINFORMATICS, 2007, 23, 1168-1168 | 23 |
| 2008 | CN Hayes, D Diez, N Joannin, W Honda, M Kanehisa, M Wahlgren, ... | varDB: a pathogen-specific sequence database of protein families involved in antigenic variation | BIOINFORMATICS, 2008, 24, 2564-2565 | 21 |
| 2009 | L Folkersen, D Diez, CE Wheelock, JZ Haeggström, S Goto, P Eriksson, ... | GeneRegionScan: a Bioconductor package for probe-level analysis of specific, small regions of the genome | BIOINFORMATICS, 2009, 25, 1978-1979 | 13 |
| 2017 | B Nosirov, J Billaud, A Vandenbon, D Diez, E Wijaya, KJ Ishii, ... | Mapping circulating serum miRNAs to their immune-related target mRNAs | ADVANCES AND APPLICATIONS IN BIOINFORMATICS AND CHEMISTRY: AABC, 2017, 10, 1-1 | 5 |
| 2010 | D Diez, N Hayes, N Joannin, J Normark, M Kanehisa, M Wahlgren, ... | varDB: A database of antigenic variant sequences—Current status and future prospects | ACTA TROPICA, 2010, 114, 144-151 | 4 |
| 2016 | A Bueno, I Morilla, D Diez, AA Moya-Garcia, J Lozano, JAG Ranea | Exploring the interactions of the RAS family in the human protein network and their potential implications in RAS-directed therapies | ONCOTARGET, 2016, 7, 75810-75810 | 3 |
| 2011 | GM Kirwan, D Diez, JZ Haeggström, S Goto, CE Wheelock | Systems Biology Approaches for Investigating the Relationship Between Lipids and Cardiovascular Disease | CURRENT CARDIOVASCULAR RISK REPORTS, 2011, 1-10 | 2 |
| 2009 | CN Hayes, D Diez, N Joannin, M Kanehisa, M Wahlgren, CE Wheelock, ... | Tools for investigating mechanisms of antigenic variation: new extensions to varDB | GENOME INFORMATICS 2009: GENOME INFORMATICS SERIES VOL., 2009, 23, 46-59 | 1 |
| 2020 | A Vandenbon, D Diez | A clustering-independent method for finding differentially expressed genes in single-cell transcriptome data | NATURE COMMUNICATIONS, 2020, 11, 1-10 | 0 |
| 2020 | S Teraguchi, DS Saputri, MA Llamas-Covarrubias, A Davila, D Diez, ... | Methods for sequence and structural analysis of B and T cell receptor repertoires | COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2020 | 0 |
| 2015 | D Diez | rTRMui: a shiny user interface for the identification of transcriptional regulatory modules | , 2015 | 0 |
| 2014 | D Diez | rTRM: an R package for the identification of transcription regulatory modules (TRMs) | , 2014 | 0 |
| 2013 | D Diez | Codelink Legacy: the old Codelink class | , 2013 | 0 |
| 2012 | D Miranda-Saavedra, A Hutchins, S Poulain, D Diez | Control of the anti-inflammatory response by STAT3: W09. 003 | IMMUNOLOGY, 2012, 137 | 0 |
| 2011 | FL D'Alexandria, D Grapov, P Golapacharyulu, D Diez, S Goto, ... | Systems-based approaches to elucidating gender-specific mechanisms in the etiology of atherosclerosis | METABOMEETING, 2011, 2011, 27-27 | 0 |
| 2011 | J Bernal, D Díez, C GRIJOTA-MARTINEZ, G Morreale de Escobar, ... | Lack of Action of Exogenously Administered T3 on the Fetal Rat Brain Despite Expression of the Monocarboxylate Transporter 8 | , 2011 | 0 |
| 2010 | E Ausó, M Belinchón, P Berbel, J Bernal, D Díez, P Gil-Ibáñez, ... | Thyroid hormone regulation of gene expression in the developing rat fetal cerebral cortex: prominent role of the Ca2+/calmodulin-dependent protein kinase IV pathway | , 2010 | 0 |
| 2010 | J Bernal, A Ceballos, C Di Cosmo, D Díez, AM Dumitrescu, VA Galton, ... | Thyroid Hormone-regulated mouse cerebral cortex genes are differentially dependent on the source of the hotmone: a study in monocarboxylate transporter-8-and deiodinase-2 … | , 2010 | 0 |
| 2009 | D Diez, M Kanehisa, S Goto | Evolution of antigenic gene families in the Plasmodium genus (バイオ情報学 (BIO) Vol. 2009-BIO-19) | 情報処理学会研究報告. BIO, バイオ情報学= IPSJ SIG TECHNICAL REPORTS 19, R1-R, 2009, 12 | 0 |
| 2009 | D Diez, M Kanehisa, S Goto | Evolution of antigenic gene families in the Plasmodium genus | , 2009 | 0 |
| 2008 | P Agretti, J Bernal, G De Marco, D Díez, C GRIJOTA-MARTINEZ, ... | Thyroid Hormone action in the adult brain: gene expression profiling of the effects of single and multiple doses of triiodo-L-thyronine in the rat stratum | , 2008 | 0 |
| 2008 | CN Hayes, D Diez, N Joannin, M Kanehisa, S Goto | Improving alignment of hypervariable regions for varDB | GIW, 2008, 2008 | 0 |
| 2008 | D Diez, N Hayes, N Joannin, M Kanehisa, M Wahlgren, CE Wheelock, ... | A framework for mining GenBank: Implementation for the varDB project | GIW, 2008, 2008 | 0 |
| 2006 | D Diez, U Ribacke, C Wheelock, M Wahlgren, S Goto | Analysis of the Sub-Telomeric Region of the Malaria Parasite P. falciparum Using aCGH Data | GIW, 2006, 2006 | 0 |
