| 2009 |
S Li, H Li, M Li, Y Shyr, L Xie, Y Li |
Improved prediction of lysine acetylation by support vector machines |
PROTEIN AND PEPTIDE LETTERS, 2009, 16, 977-983 |
91 |
| 2012 |
M Fritsche, S Li, DW Heermann, PA Wiggins |
A model for Escherichia coli chromosome packaging supports transcription factor-induced DNA domain formation |
NUCLEIC ACIDS RESEARCH, 2012, 40, 972-980 |
73 |
| 2019 |
J Rozewicki, S Li, KM Amada, DM Standley, K Katoh |
MAFFT-DASH: integrated protein sequence and structural alignment |
NUCLEIC ACIDS RESEARCH 47 (W1), W5-W, 2019, 10 |
52 |
| 2017 |
KK Nyati, K Masuda, MMU Zaman, PK Dubey, D Millrine, JP Chalise, ... |
TLR4-induced NF-κB and MAPK signaling regulate the IL-6 mRNA stabilizing protein Arid5a |
NUCLEIC ACIDS RESEARCH, 2017, 45, 2687-2703 |
50 |
| 2014 |
S Li, K Yamashita, KM Amada, DM Standley |
Quantifying sequence and structural features of protein–RNA interactions |
NUCLEIC ACIDS RESEARCH, 2014, 42, 10086-10098 |
34 |
| 2017 |
R Yonehara, S Nada, T Nakai, M Nakai, A Kitamura, A Ogawa, ... |
Structural basis for the assembly of the Ragulator-Rag GTPase complex |
NATURE COMMUNICATIONS, 2017, 8, 1-11 |
30 |
| 2018 |
H Hanieh, K Masuda, H Metwally, JP Chalise, M Mohamed, KK Nyati, ... |
Arid5a stabilizes OX40 mRNA in murine CD4+ T cells by recognizing a stem‐loop structure in its 3′UTR |
EUROPEAN JOURNAL OF IMMUNOLOGY, 2018, 48, 593-604 |
17 |
| 2017 |
S Sakakibara, T Arimori, K Yamashita, H Jinzai, D Motooka, S Nakamura, ... |
Clonal evolution and antigen recognition of anti-nuclear antibodies in acute systemic lupus erythematosus |
SCIENTIFIC REPORTS, 2017, 7, 1-14 |
14 |
| 2019 |
D Schritt, S Li, J Rozewicki, K Katoh, K Yamashita, W Volkmuth, G Cavet, ... |
Repertoire builder: high-throughput structural modeling of B and T cell receptors |
MOLECULAR SYSTEMS DESIGN & ENGINEERING, 2019, 4, 761-768 |
10 |
| 2013 |
S Li, DW Heermann |
Transcriptional regulatory network shapes the genome structure of Saccharomyces cerevisiae |
NUCLEUS, 2013, 4, 216-228 |
9 |
| 2015 |
D Hall, S Li, K Yamashita, R Azuma, JA Carver, DM Standley |
RNA–LIM: A novel procedure for analyzing protein/single-stranded RNA propensity data with concomitant estimation of interface structure |
ANALYTICAL BIOCHEMISTRY, 2015, 472, 52-61 |
4 |
| 2019 |
Z Xu, S Li, J Rozewicki, K Yamashita, S Teraguchi, T Inoue, R Shinnakasu, ... |
Functional clustering of B cell receptors using sequence and structural features |
MOLECULAR SYSTEMS DESIGN & ENGINEERING, 2019, 4, 769-778 |
3 |
| 2014 |
D Hall, S Li, K Yamashita, R Azuma, JA Carver, DM Standley |
A novel protein distance matrix based on the minimum arc-length between two amino-acid residues on the surface of a globular protein |
BIOPHYSICAL CHEMISTRY, 2014, 190, 50-55 |
3 |
| 2020 |
H Metwally, T Tanaka, S Li, G Parajuli, S Kang, H Hanieh, S Hashimoto, ... |
Noncanonical STAT1 phosphorylation expands its transcriptional activity into promoting LPS-induced IL-6 and IL-12p40 production |
SCIENCE SIGNALING, 2020, 13 |
2 |
| 2020 |
K Fukushima, T Satoh, F Sugihara, Y Sato, T Okamoto, Y Mitsui, S Yoshio, ... |
Dysregulated Expression of the Nuclear Exosome Targeting Complex Component Rbm7 in Nonhematopoietic Cells Licenses the Development of Fibrosis |
IMMUNITY 52 (3), 542-556., 2020, 13 |
2 |
| 2019 |
H Fukuda, S Li, L Sardo, JL Smith, K Yamashita, AD Sarca, K Shirakawa, ... |
Structural Determinants of the APOBEC3G N-terminal domain for HIV-1 RNA association |
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2019, 9, 129-129 |
2 |
| 2019 |
S Li, J Wilamowski, S Teraguchi, FJ van Eerden, J Rozewicki, A Davila, ... |
Structural modeling of lymphocyte receptors and their antigens |
IN VITRO DIFFERENTIATION OF T-CELLS, 2019, 207-229 |
2 |
| 2013 |
S Li, DW Heermann |
Using chimaeric expression sequence tag as the reference to identify three-dimensional chromosome contacts |
DNA RESEARCH, 2013, 20, 45-53 |
2 |
| 2020 |
S Teraguchi, DS Saputri, MA Llamas-Covarrubias, A Davila, D Diez, ... |
Methods for sequence and structural analysis of B and T cell receptor repertoires |
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2020 |
0 |
| 2020 |
DS Saputri, S Li, FJ Van Eerden, J Rozewicki, Z Xu, HS Ismanto, A Davila, ... |
Flexible, functional and familiar: characteristics of SARS-CoV-2 spike protein evolution |
FRONTIERS IN MICROBIOLOGY, 2020, 11, 2112-2112 |
0 |
| 2019 |
DM Standley, JDO Nieri, S Li, D Schritt, K Yamashita |
Immunological entity clustering software |
US PATENT APP. 16/333,875, 2019 |
0 |
| 2017 |
D Schritt, K Katoh, S Li, DM Standley |
Modeling Biocatalysts |
FUTURE DIRECTIONS IN BIOCATALYSIS, 2017, 385-398 |
0 |
