Education
Aug 2012- July 2016 Bachelor of Pharmacy, Institute Teknologi Bandung, Indonesia
Oct 2016- Mar 2017 Research student in Research Institute for Microbial Diseases, The University of Osaka
Apr 2017- Mar 2019 Master's of Biosciences, Graduate School of Frontier Biosciences, The University of Osaka
Apr 2019- Sep 2022 Ph.D. in Biosciences, Graduate School of Frontier Biosciences, The University of Osaka
Research & Career
Research :
Bioinformatics analysis of antibody specificity
Complex bacterial toxin engineering for applications such as yeast display and vaccines
Career :
Oct 2022 - Mar 2025 Post-Doctoral Researcher, Dept. Genome Informatics, RIMD, The University of Osaka
Apr 2025 - now Specially-appointed Assistant Professor, Dept. Genome Informatics, RIMD, The University of Osaka
Awards
Recipient of Taniguchi International Scholarship (2016-2022)
Publications
| Year | Authors | Title | Publication | Cites |
|---|---|---|---|---|
| 2024 | Paran, F.J.; Oyama, R.; Khasawneh, A.; Ismanto, H.S.; Sherif, A.A.; Saputri, D.S.; Ono, C.; Saita, M.; Takei, S.; Horiuchi, Y.; Yagi, K.; Matsuura, Y.; Okazaki, Y.; Takahashi, K.; Standley, D.M.; Tabe, Y.; Naito, T. | BCR, not TCR, repertoire diversity is associated with favorable COVID-19 prognosis | FRONT. IMMUNOL., 2024 | 0 |
| 2024 | Xu, Z.; Ismanto, H.S.; Saputri, D.S.; Haruna, S.; Sun, G.; Wilamowski, J.; Teraguchi, S.; Sengupta, A.; Li, S.; Standley, D.M. | Robust detection of infectious disease, autoimmunity, and cancer from the paratope networks of adaptive immune receptors | BRIEF. BIOINFORM., 2024 | 0 |
| 2023 | Lusiany, T.; Terada, T.; Kishikawa, J.; Hirose, M.; Chen, D.V.; Sugihara, F.; Ismanto, H.S.; van Eerden, F.J.; Li, S.; Kato, T.; Arase, H.; Yoshiharu, M.; Okada, M.; Standley, D.M. | Enhancement of SARS-CoV-2 Infection via Crosslinking of Adjacent Spike Proteins by N-Terminal Domain-Targeting Antibodies | VIRUSES, 2023 | 0 |
| 2023 | Lusiany, T.; Xu, Z.; Saputri, D.S.; Ismanto, H.S.; Nazlica, S.A.; Standley, D.M. | Structural Modeling of Adaptive Immune Responses to Infection | METHODS MOL. BIOL., 2023 | 0 |
| 2023 | Saputri, D.S.; Ismanto, H.S.; Nugraha, D.K.; Xu, Z.; Horiguchi, Y.; Sakakibara, S.; Standley, D.M. | Deciphering the antigen specifities of antibodies by clustering their complementarity determining region sequences | MSYSTEMS, 2023 | 0 |
| 2022 | Xu, Z.; Ismanto, H.S.; Zhou, H.; Saputri, D.S.; Sugihara, F.; Standley, D.M. | Advances in antibody discovery from human BCR repertoires | FRONT. BIOINFORM., 2022 | 0 |
| 2022 | Hanna, C.C.; Maxwell, J.W.C.; Ismanto, H.S.; Ashhurst, A.S.; Artner, L.M.; Rudrawar, S.; Britton, W.J.; Yamasaki, S.; Payne, R.J. | Synthetic vaccines targeting Mincle through conjugation of trehalose dibehenate | CHEM. COMM., 2022 | 0 |
| 2022 | Ismanto, H.S.; Xu, Z.; Saputri, D.S.; Wilamowski, J.; Li, S.; Nugraha, D.K.; Horiguchi, Y.; Okada, M.; Arase, H.; Standley, D.M. | Landscape of infection enhancing antibodies in COVID-19 and healthy donors | COMPUT. STRUCT. BIOTECHNOL. J., 2022 | 0 |
| 2020 | Saputri, D.S.; Li, S.; van Eerden, F.J.; Rozewicki, J.; Xu, Z.; Ismanto, H.S.; Davila, A.; Teraguchi, S.; Katoh, K.; Standley, D.M. | Flexible, Functional, and Familiar: Characteristics of SARS-CoV-2 Spike Protein Evolution | FRONT. MICROBIOL., 2020 | 0 |
| 2020 | Teraguchi, S.; Saputri, D.S.; Llamas-Covarrubias, M.A.; Davila, A.; Diez, D.; Nazlica, S.A.; Rozewicki, J.; Ismanto, H.S.; Wilamowski, J.; Xie, J.; Xu, Z.; Loza-Lopez, M.D.J.; van Eerden, F.J.; Li, S.; Standley, D.M. | Methods for sequence and structural analysis of B and T cell receptor repertoires | COMPUT. STRUCT. BIOTECHNOL. J., 2020 | 0 |
| 2018 | Ota, F.; Hirayama, T.; Kizuka, Y.; Yamaguchi, Y.; Fujinawa, R.; Nagata, M.; Ismanto, H.S.; Lepenies, B.; Aretz, J.; Rademacher, C.; Seeberger, P.H.; Angata, T.; Kitazume, S.; Yoshida, K.; Betsuyaku, T.; Kida, K.; Yamasaki, S.; Taniguchi, N. | High affinity sugar ligand of C-type lectin receptor langerin | BIOCHEM. BIOPHYS. ACTA GEN. SUBJ., 2018 | 0 |
